06-Aug-2014 - Universität Leipzig

Breaking a chemical bond

A new theory for the breaking of (bio-)chemical bonds under load may help to predict the strength and performance of synthetic nanostructures and proteins, on a molecular level.

The fundamental question how a molecular bond breaks is of interest in many fields of science and has been studied extensively. Yet, now writing in Nature Communications, a group of theoretical physicists from the University of Leipzig, Germany, has put forward a more powerful analytical formula for forcible bond breaking than previously available. It predicts how likely a bond will break at a given load, if probed with a prescribed loading protocol. This so-called rupture force distribution is the most informative and most commonly measured quantity in modern single-molecule force spectroscopy experiments (which may roughly be thought of as nanoscopic versions of the conventional crash- or breaking tests employed in materials science and engineering). Such experiments are nowadays performed in large numbers in molecular biology and biophysics labs to probe the mechanical strength of individual macromolecular bonds.

Recent methodological advances have pushed force spectroscopy assays to ever higher loading rates (the equivalent of the speed employed in the macroscopic crash-test). This provided a strong incentive for the Leipzig team to improve on current state-of-the-art theories for forcible bond breaking, which are limited to comparatively low speeds. Moreover, the new equation solves another problem that has bothered experts in the field for many years. Force spectroscopy experiments are often simulated with sophisticated all-atom computer models to supplement the experimental data with information on internal molecular details that cannot be resolved in a laboratory setting. However, because of their enormous complexity, such computer simulations operate at extremely high loading rates to cut down on the runtime. As a consequence, simulation and experiment were so far two essentially distinct branches of force spectroscopy. The new equation, which gives exact results for both low and high loading rates, will thus suit both experimentalists and computer scientists, and help them to systematically analyze and compare their results. This should eventually improve our microscopic understanding of the strength of synthetic materials and of how proteins attain and maintain their three-dimensional structure and perform conformational changes, which are core features determining the function and dysfunction of these
amazing engines of life.

Facts, background information, dossiers

More about Uni Leipzig

  • News

    Newly discovered enzyme breaks down PET plastic in record time

    Plastic bottles, punnets, wrap – such lightweight packaging made of PET plastic becomes a problem if it is not recycled. Scientists at Leipzig University have now discovered a highly efficient enzyme that degrades PET in record time. The enzyme PHL7, which the researchers found in a compost ... more

    Heat storage: Scientists develop material that is stable, efficient and eco-friendly

    A new heat storage material could help to significantly improve the energy efficiency of buildings. Developed by researchers at Martin Luther University Halle-Wittenberg (MLU) and the University of Leipzig, it can be used to store surplus heat and release it back into the environment when n ... more

    Controlling the metabolism of cancer cells

    With their altered metabolism, cancer cells grow faster than normal cells. Scientists at Leipzig University’s Faculty of Medicine have now discovered that cancer cells need the succinate receptor to control their metabolic rate. This knowledge should in future help doctors to develop treatm ... more

  • q&more articles

    Cell cultures in the third dimension

    For chemicals and pharmaceutical products that are brought to the market, meaningful toxicological data needs to be ascertained. While, to the present day, animal experiments play a key role in this task, the challenge is to replace them with high-validity tests carried out in organoid cell ... more

  • Authors

    Dr. Peggy Stock

    Peggy Stock, born in 1976, studied biology at the Martin Luther University of Halle-Wittenberg and received her doctorate in 2005. Since her return from a research stay at the University of Pittsburgh (USA) she has been working in the Applied Molecular Hepatology research group of Professor ... more

    Dr. Katja Schellenberg

    completed her studies for a Bachelor of Science in Molecular Biotechnology from TU Dresden before graduating from the international degree programme “Molecular Medicine” at Charité – Universitätsmedizin (Berlin) with an M.Sc. in 2009. Funded by a grant from Charité, she then completed her d ... more

q&more – the networking platform for quality excellence in lab and process

The q&more concept is to increase the visibility of recent research and innovative solutions, and support the exchange of knowledge. In the broad spectrum of subjects covered, the focus is on achieving maximum quality in highly innovative sectors. As a modern knowledge platform, q&more offers market participants one-of-a-kind networking opportunities. Cutting-edge research is presented by authors of international repute. Attractively presented in a high-quality context, and published in German and English, the original articles introduce new concepts and highlight unconventional solution strategies.

> more about q&more

q&more is supported by: